Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdx1P52946 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdx1P52946 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pdx1P52946 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pdx1P52946 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdx1P52946 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.32■□□□□ 0.04
Pdx1P52946 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Gm7461-201ENSMUST00000058918 827 ntBASIC15.32■□□□□ 0.04
Pdx1P52946 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdx1P52946 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdx1P52946 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.31■□□□□ 0.04
Pdx1P52946 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pdx1P52946 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Pdx1P52946 Gm15173-201ENSMUST00000122049 433 ntBASIC15.31■□□□□ 0.04
Pdx1P52946 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pdx1P52946 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.31■□□□□ 0.04
Pdx1P52946 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdx1P52946 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.31■□□□□ 0.04
Pdx1P52946 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Pdx1P52946 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdx1P52946 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.31■□□□□ 0.04
Pdx1P52946 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.31■□□□□ 0.04
Pdx1P52946 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdx1P52946 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.31■□□□□ 0.04
Pdx1P52946 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.31■□□□□ 0.04
Pdx1P52946 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Pdx1P52946 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pdx1P52946 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pdx1P52946 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pdx1P52946 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pdx1P52946 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.3■□□□□ 0.04
Pdx1P52946 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Pdx1P52946 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.3■□□□□ 0.04
Pdx1P52946 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pdx1P52946 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pdx1P52946 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.29■□□□□ 0.04
Pdx1P52946 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pdx1P52946 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pdx1P52946 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pdx1P52946 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.29■□□□□ 0.04
Pdx1P52946 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.29■□□□□ 0.04
Pdx1P52946 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.29■□□□□ 0.04
Pdx1P52946 Gm7230-201ENSMUST00000173026 815 ntBASIC15.29■□□□□ 0.04
Pdx1P52946 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pdx1P52946 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pdx1P52946 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms