Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.04■□□□□ -0
Hnf4aP49698 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.04■□□□□ -0
Hnf4aP49698 Gm27867-201ENSMUST00000184778 125 ntBASIC15.04■□□□□ -0
Hnf4aP49698 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.04■□□□□ -0
Hnf4aP49698 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Hnf4aP49698 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Hnf4aP49698 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Hnf4aP49698 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hnf4aP49698 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Hnf4aP49698 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Hnf4aP49698 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Gm12895-201ENSMUST00000122214 226 ntBASIC15.03■□□□□ -0
Hnf4aP49698 Gm12497-201ENSMUST00000138778 237 ntBASIC15.03■□□□□ -0
Hnf4aP49698 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Gm17807-201ENSMUST00000186869 298 ntBASIC15.03■□□□□ -0
Hnf4aP49698 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.03■□□□□ -0
Hnf4aP49698 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.03■□□□□ -0
Hnf4aP49698 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Hnf4aP49698 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.03■□□□□ -0
Hnf4aP49698 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hnf4aP49698 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.02■□□□□ -0
Hnf4aP49698 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Hnf4aP49698 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Hnf4aP49698 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.02■□□□□ -0
Hnf4aP49698 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.02■□□□□ -0
Hnf4aP49698 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Hnf4aP49698 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hnf4aP49698 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hnf4aP49698 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hnf4aP49698 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hnf4aP49698 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hnf4aP49698 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Hnf4aP49698 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hnf4aP49698 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Hnf4aP49698 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hnf4aP49698 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Hnf4aP49698 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hnf4aP49698 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Hnf4aP49698 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.02□□□□□ -0.01
Hnf4aP49698 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hnf4aP49698 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Hnf4aP49698 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hnf4aP49698 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hnf4aP49698 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.01□□□□□ -0.01
Hnf4aP49698 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Hnf4aP49698 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.01□□□□□ -0.01
Hnf4aP49698 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Hnf4aP49698 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.01□□□□□ -0.01
Hnf4aP49698 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hnf4aP49698 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms