Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Brca1P48754 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Brca1P48754 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Brca1P48754 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Brca1P48754 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Gm6007-201ENSMUST00000208170 823 ntBASIC17.2■□□□□ 0.34
Brca1P48754 Gm18049-201ENSMUST00000208909 581 ntBASIC17.2■□□□□ 0.34
Brca1P48754 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.2■□□□□ 0.34
Brca1P48754 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.2■□□□□ 0.34
Brca1P48754 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Brca1P48754 Asic1-205ENSMUST00000228185 1818 ntBASIC17.2■□□□□ 0.34
Brca1P48754 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Brca1P48754 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.19■□□□□ 0.34
Brca1P48754 Gm38225-201ENSMUST00000194001 393 ntBASIC17.19■□□□□ 0.34
Brca1P48754 Gm44719-201ENSMUST00000206404 149 ntBASIC17.19■□□□□ 0.34
Brca1P48754 Gm9899-201ENSMUST00000065519 555 ntBASIC17.19■□□□□ 0.34
Brca1P48754 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.19■□□□□ 0.34
Brca1P48754 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Brca1P48754 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Brca1P48754 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.19■□□□□ 0.34
Brca1P48754 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.19■□□□□ 0.34
Brca1P48754 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Brca1P48754 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Gm14928-201ENSMUST00000120198 477 ntBASIC17.19■□□□□ 0.34
Brca1P48754 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.19■□□□□ 0.34
Brca1P48754 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Brca1P48754 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Brca1P48754 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Brca1P48754 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.18■□□□□ 0.34
Brca1P48754 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.18■□□□□ 0.34
Brca1P48754 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Brca1P48754 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Brca1P48754 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Brca1P48754 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.18■□□□□ 0.34
Brca1P48754 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Brca1P48754 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.18■□□□□ 0.34
Brca1P48754 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Brca1P48754 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Brca1P48754 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brca1P48754 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.17■□□□□ 0.34
Brca1P48754 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brca1P48754 Gm27838-201ENSMUST00000184829 128 ntBASIC17.17■□□□□ 0.34
Brca1P48754 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.17■□□□□ 0.34
Brca1P48754 Gm6218-201ENSMUST00000219812 628 ntBASIC17.17■□□□□ 0.34
Brca1P48754 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Brca1P48754 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brca1P48754 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Brca1P48754 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Brca1P48754 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brca1P48754 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brca1P48754 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brca1P48754 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brca1P48754 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Brca1P48754 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.17■□□□□ 0.34
Brca1P48754 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Brca1P48754 Mir7085-201ENSMUST00000184353 66 ntBASIC17.17■□□□□ 0.34
Brca1P48754 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Brca1P48754 Gm45384-201ENSMUST00000210451 277 ntBASIC17.17■□□□□ 0.34
Brca1P48754 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brca1P48754 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Brca1P48754 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Brca1P48754 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brca1P48754 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.16■□□□□ 0.34
Brca1P48754 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brca1P48754 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brca1P48754 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.16■□□□□ 0.34
Brca1P48754 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Brca1P48754 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms