Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sox2P48432 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox2P48432 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.55□□□□□ -0.08
Sox2P48432 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox2P48432 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.55□□□□□ -0.08
Sox2P48432 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Sox2P48432 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Efs-202ENSMUST00000227037 2540 ntBASIC14.55□□□□□ -0.08
Sox2P48432 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.55□□□□□ -0.08
Sox2P48432 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Sox2P48432 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.55□□□□□ -0.08
Sox2P48432 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox2P48432 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Sox2P48432 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.54□□□□□ -0.08
Sox2P48432 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Sox2P48432 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.54□□□□□ -0.08
Sox2P48432 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.54□□□□□ -0.08
Sox2P48432 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Mir6404-201ENSMUST00000183699 94 ntBASIC14.54□□□□□ -0.08
Sox2P48432 Gm7889-201ENSMUST00000185591 958 ntBASIC14.54□□□□□ -0.08
Sox2P48432 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.54□□□□□ -0.08
Sox2P48432 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sox2P48432 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox2P48432 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox2P48432 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.54□□□□□ -0.08
Sox2P48432 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.53□□□□□ -0.08
Sox2P48432 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sox2P48432 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.53□□□□□ -0.08
Sox2P48432 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Gm45058-201ENSMUST00000205810 766 ntBASIC14.53□□□□□ -0.08
Sox2P48432 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox2P48432 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sox2P48432 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox2P48432 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox2P48432 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sox2P48432 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox2P48432 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.52□□□□□ -0.08
Sox2P48432 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox2P48432 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox2P48432 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox2P48432 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox2P48432 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox2P48432 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Sox2P48432 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox2P48432 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.52□□□□□ -0.08
Sox2P48432 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox2P48432 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox2P48432 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox2P48432 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox2P48432 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox2P48432 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sox2P48432 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox2P48432 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.52□□□□□ -0.09
Sox2P48432 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox2P48432 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sox2P48432 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox2P48432 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox2P48432 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Sox2P48432 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox2P48432 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms