Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx3P48381 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rfx3P48381 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx3P48381 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx3P48381 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rfx3P48381 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx3P48381 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rfx3P48381 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.02□□□□□ -0.16
Rfx3P48381 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx3P48381 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfx3P48381 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rfx3P48381 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.02□□□□□ -0.17
Rfx3P48381 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Rfx3P48381 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rfx3P48381 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rfx3P48381 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.02□□□□□ -0.17
Rfx3P48381 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfx3P48381 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfx3P48381 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfx3P48381 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfx3P48381 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Mir6404-201ENSMUST00000183699 94 ntBASIC14.01□□□□□ -0.17
Rfx3P48381 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.01□□□□□ -0.17
Rfx3P48381 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.01□□□□□ -0.17
Rfx3P48381 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rfx3P48381 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rfx3P48381 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfx3P48381 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rfx3P48381 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Rfx3P48381 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14□□□□□ -0.17
Rfx3P48381 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Gm21362-201ENSMUST00000194272 928 ntBASIC14□□□□□ -0.17
Rfx3P48381 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14□□□□□ -0.17
Rfx3P48381 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rfx3P48381 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14□□□□□ -0.17
Rfx3P48381 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rfx3P48381 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfx3P48381 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfx3P48381 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms