Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox18P43680 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox18P43680 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.84□□□□□ -0.03
Sox18P43680 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.84□□□□□ -0.03
Sox18P43680 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.84□□□□□ -0.03
Sox18P43680 Thap2-203ENSMUST00000218989 527 ntBASIC14.84□□□□□ -0.03
Sox18P43680 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox18P43680 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox18P43680 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.84□□□□□ -0.03
Sox18P43680 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox18P43680 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox18P43680 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox18P43680 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox18P43680 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox18P43680 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox18P43680 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox18P43680 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox18P43680 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Sox18P43680 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Sox18P43680 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.83□□□□□ -0.04
Sox18P43680 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sox18P43680 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Sox18P43680 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.83□□□□□ -0.04
Sox18P43680 Gm20614-201ENSMUST00000177106 632 ntBASIC14.83□□□□□ -0.04
Sox18P43680 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sox18P43680 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.83□□□□□ -0.04
Sox18P43680 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.83□□□□□ -0.04
Sox18P43680 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.83□□□□□ -0.04
Sox18P43680 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.83□□□□□ -0.04
Sox18P43680 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox18P43680 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.82□□□□□ -0.04
Sox18P43680 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sox18P43680 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.82□□□□□ -0.04
Sox18P43680 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sox18P43680 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sox18P43680 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sox18P43680 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.82□□□□□ -0.04
Sox18P43680 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.82□□□□□ -0.04
Sox18P43680 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.82□□□□□ -0.04
Sox18P43680 Gm24158-201ENSMUST00000175263 71 ntBASIC14.82□□□□□ -0.04
Sox18P43680 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sox18P43680 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sox18P43680 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sox18P43680 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox18P43680 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Sox18P43680 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.81□□□□□ -0.04
Sox18P43680 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sox18P43680 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Sox18P43680 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox18P43680 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox18P43680 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox18P43680 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox18P43680 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox18P43680 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.81□□□□□ -0.04
Sox18P43680 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.81□□□□□ -0.04
Sox18P43680 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sox18P43680 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox18P43680 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox18P43680 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms