Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc2P43407 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sdc2P43407 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.4■□□□□ 0.38
Sdc2P43407 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sdc2P43407 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sdc2P43407 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sdc2P43407 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sdc2P43407 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm8825-201ENSMUST00000182565 998 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm4518-201ENSMUST00000182638 718 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm27742-201ENSMUST00000184667 60 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm44454-201ENSMUST00000198541 138 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.4■□□□□ 0.38
Sdc2P43407 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Sdc2P43407 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.4■□□□□ 0.38
Sdc2P43407 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc2P43407 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sdc2P43407 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sdc2P43407 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sdc2P43407 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Sdc2P43407 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.39■□□□□ 0.37
Sdc2P43407 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.39■□□□□ 0.37
Sdc2P43407 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.39■□□□□ 0.37
Sdc2P43407 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.39■□□□□ 0.37
Sdc2P43407 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Sdc2P43407 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.39■□□□□ 0.37
Sdc2P43407 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sdc2P43407 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.39■□□□□ 0.37
Sdc2P43407 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sdc2P43407 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sdc2P43407 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc2P43407 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Sdc2P43407 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Sdc2P43407 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.38■□□□□ 0.37
Sdc2P43407 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.38■□□□□ 0.37
Sdc2P43407 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Sdc2P43407 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdc2P43407 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.38■□□□□ 0.37
Sdc2P43407 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms