Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.82□□□□□ -0.36
Hist1h1aP43275 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.82□□□□□ -0.36
Hist1h1aP43275 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist1h1aP43275 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.81□□□□□ -0.36
Hist1h1aP43275 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.81□□□□□ -0.36
Hist1h1aP43275 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1aP43275 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 BC037039-201ENSMUST00000192003 2205 ntBASIC12.8□□□□□ -0.36
Hist1h1aP43275 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Gm6433-201ENSMUST00000118634 875 ntBASIC12.8□□□□□ -0.36
Hist1h1aP43275 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1aP43275 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms