Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Abca1P41233 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.88□□□□□ -0.35
Abca1P41233 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Abca1P41233 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Abca1P41233 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Abca1P41233 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.87□□□□□ -0.35
Abca1P41233 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.87□□□□□ -0.35
Abca1P41233 Gm5312-201ENSMUST00000203728 547 ntBASIC12.87□□□□□ -0.35
Abca1P41233 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.87□□□□□ -0.35
Abca1P41233 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Abca1P41233 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.87□□□□□ -0.35
Abca1P41233 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.87□□□□□ -0.35
Abca1P41233 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.87□□□□□ -0.35
Abca1P41233 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Abca1P41233 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.87□□□□□ -0.35
Abca1P41233 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Abca1P41233 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.86□□□□□ -0.35
Abca1P41233 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.86□□□□□ -0.35
Abca1P41233 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Abca1P41233 Gm27321-201ENSMUST00000185021 205 ntBASIC12.86□□□□□ -0.35
Abca1P41233 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Abca1P41233 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 AA543401-201ENSMUST00000164248 1269 ntBASIC12.86□□□□□ -0.35
Abca1P41233 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.86□□□□□ -0.35
Abca1P41233 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.86□□□□□ -0.35
Abca1P41233 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Abca1P41233 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Abca1P41233 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Abca1P41233 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Abca1P41233 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Abca1P41233 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Abca1P41233 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms