Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.32□□□□□ -0.12
Thbs1P35441 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.32□□□□□ -0.12
Thbs1P35441 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Thbs1P35441 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Thbs1P35441 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Thbs1P35441 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs1P35441 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Thbs1P35441 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.31□□□□□ -0.12
Thbs1P35441 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Thbs1P35441 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.31□□□□□ -0.12
Thbs1P35441 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.31□□□□□ -0.12
Thbs1P35441 Gm7506-201ENSMUST00000207758 815 ntBASIC14.31□□□□□ -0.12
Thbs1P35441 Gm8655-201ENSMUST00000221159 852 ntBASIC14.31□□□□□ -0.12
Thbs1P35441 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.31□□□□□ -0.12
Thbs1P35441 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs1P35441 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Thbs1P35441 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Thbs1P35441 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.3□□□□□ -0.12
Thbs1P35441 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Thbs1P35441 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.3□□□□□ -0.12
Thbs1P35441 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.3□□□□□ -0.12
Thbs1P35441 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.3□□□□□ -0.12
Thbs1P35441 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.3□□□□□ -0.12
Thbs1P35441 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thbs1P35441 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.29□□□□□ -0.12
Thbs1P35441 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.29□□□□□ -0.12
Thbs1P35441 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.29□□□□□ -0.12
Thbs1P35441 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.29□□□□□ -0.12
Thbs1P35441 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Thbs1P35441 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Thbs1P35441 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Thbs1P35441 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Thbs1P35441 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.29□□□□□ -0.12
Thbs1P35441 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Thbs1P35441 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.29□□□□□ -0.12
Thbs1P35441 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thbs1P35441 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms