Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PdgfbP31240 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.45■□□□□ 0.06
PdgfbP31240 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.45■□□□□ 0.06
PdgfbP31240 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PdgfbP31240 Gm28630-201ENSMUST00000187806 498 ntBASIC15.45■□□□□ 0.06
PdgfbP31240 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.45■□□□□ 0.06
PdgfbP31240 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.45■□□□□ 0.06
PdgfbP31240 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PdgfbP31240 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PdgfbP31240 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.45■□□□□ 0.06
PdgfbP31240 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PdgfbP31240 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.45■□□□□ 0.06
PdgfbP31240 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PdgfbP31240 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PdgfbP31240 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.44■□□□□ 0.06
PdgfbP31240 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PdgfbP31240 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.44■□□□□ 0.06
PdgfbP31240 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.44■□□□□ 0.06
PdgfbP31240 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.44■□□□□ 0.06
PdgfbP31240 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.44■□□□□ 0.06
PdgfbP31240 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PdgfbP31240 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PdgfbP31240 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.44■□□□□ 0.06
PdgfbP31240 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.44■□□□□ 0.06
PdgfbP31240 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PdgfbP31240 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PdgfbP31240 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.44■□□□□ 0.06
PdgfbP31240 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PdgfbP31240 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PdgfbP31240 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.44■□□□□ 0.06
PdgfbP31240 Syt7-204ENSMUST00000223586 1344 ntBASIC15.43■□□□□ 0.06
PdgfbP31240 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.43■□□□□ 0.06
PdgfbP31240 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.43■□□□□ 0.06
PdgfbP31240 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.43■□□□□ 0.06
PdgfbP31240 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PdgfbP31240 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PdgfbP31240 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PdgfbP31240 Gm18187-201ENSMUST00000196476 984 ntBASIC15.43■□□□□ 0.06
PdgfbP31240 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.43■□□□□ 0.06
PdgfbP31240 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.43■□□□□ 0.06
PdgfbP31240 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PdgfbP31240 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PdgfbP31240 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PdgfbP31240 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.43■□□□□ 0.06
PdgfbP31240 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PdgfbP31240 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.43■□□□□ 0.06
PdgfbP31240 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PdgfbP31240 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PdgfbP31240 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PdgfbP31240 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PdgfbP31240 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PdgfbP31240 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.42■□□□□ 0.06
PdgfbP31240 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Gm14928-201ENSMUST00000120198 477 ntBASIC15.42■□□□□ 0.06
PdgfbP31240 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.42■□□□□ 0.06
PdgfbP31240 Gm18737-201ENSMUST00000173594 937 ntBASIC15.42■□□□□ 0.06
PdgfbP31240 Gm25144-201ENSMUST00000179561 110 ntBASIC15.42■□□□□ 0.06
PdgfbP31240 Gm25352-201ENSMUST00000179815 110 ntBASIC15.42■□□□□ 0.06
PdgfbP31240 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.42■□□□□ 0.06
PdgfbP31240 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.42■□□□□ 0.06
PdgfbP31240 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
PdgfbP31240 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.42■□□□□ 0.06
PdgfbP31240 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PdgfbP31240 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PdgfbP31240 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PdgfbP31240 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.41■□□□□ 0.06
PdgfbP31240 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PdgfbP31240 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms