Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VtnP29788 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.03□□□□□ -0.16
VtnP29788 Mir5126-201ENSMUST00000175513 77 ntBASIC14.03□□□□□ -0.16
VtnP29788 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.03□□□□□ -0.16
VtnP29788 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.03□□□□□ -0.16
VtnP29788 Gm5364-201ENSMUST00000216789 889 ntBASIC14.03□□□□□ -0.16
VtnP29788 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VtnP29788 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VtnP29788 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VtnP29788 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
VtnP29788 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.03□□□□□ -0.16
VtnP29788 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.03□□□□□ -0.16
VtnP29788 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VtnP29788 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VtnP29788 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
VtnP29788 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VtnP29788 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.03□□□□□ -0.16
VtnP29788 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.02□□□□□ -0.16
VtnP29788 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VtnP29788 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VtnP29788 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
VtnP29788 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
VtnP29788 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VtnP29788 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.02□□□□□ -0.17
VtnP29788 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VtnP29788 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VtnP29788 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VtnP29788 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
VtnP29788 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.02□□□□□ -0.17
VtnP29788 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VtnP29788 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
VtnP29788 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VtnP29788 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VtnP29788 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
VtnP29788 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VtnP29788 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.01□□□□□ -0.17
VtnP29788 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.01□□□□□ -0.17
VtnP29788 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.01□□□□□ -0.17
VtnP29788 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.01□□□□□ -0.17
VtnP29788 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
VtnP29788 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.01□□□□□ -0.17
VtnP29788 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VtnP29788 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VtnP29788 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VtnP29788 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
VtnP29788 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
VtnP29788 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14□□□□□ -0.17
VtnP29788 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14□□□□□ -0.17
VtnP29788 Gm15173-201ENSMUST00000122049 433 ntBASIC14□□□□□ -0.17
VtnP29788 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
VtnP29788 Gm27646-201ENSMUST00000183989 110 ntBASIC14□□□□□ -0.17
VtnP29788 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14□□□□□ -0.17
VtnP29788 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VtnP29788 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14□□□□□ -0.17
VtnP29788 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VtnP29788 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VtnP29788 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.99□□□□□ -0.17
VtnP29788 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VtnP29788 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VtnP29788 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VtnP29788 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VtnP29788 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms