Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.73■□□□□ 0.43
Vcam1P29533 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vcam1P29533 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.73■□□□□ 0.43
Vcam1P29533 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.73■□□□□ 0.43
Vcam1P29533 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Gm18057-201ENSMUST00000208220 503 ntBASIC17.73■□□□□ 0.43
Vcam1P29533 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.73■□□□□ 0.43
Vcam1P29533 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.73■□□□□ 0.43
Vcam1P29533 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vcam1P29533 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Vcam1P29533 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Vcam1P29533 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vcam1P29533 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.72■□□□□ 0.43
Vcam1P29533 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Vcam1P29533 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.72■□□□□ 0.43
Vcam1P29533 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.72■□□□□ 0.43
Vcam1P29533 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.72■□□□□ 0.43
Vcam1P29533 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.72■□□□□ 0.43
Vcam1P29533 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.72■□□□□ 0.43
Vcam1P29533 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.72■□□□□ 0.43
Vcam1P29533 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vcam1P29533 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.71■□□□□ 0.43
Vcam1P29533 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.71■□□□□ 0.43
Vcam1P29533 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Vcam1P29533 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Vcam1P29533 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vcam1P29533 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vcam1P29533 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vcam1P29533 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vcam1P29533 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vcam1P29533 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vcam1P29533 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Vcam1P29533 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Vcam1P29533 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.7■□□□□ 0.42
Vcam1P29533 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Vcam1P29533 Gm25948-201ENSMUST00000175334 112 ntBASIC17.7■□□□□ 0.42
Vcam1P29533 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.7■□□□□ 0.42
Vcam1P29533 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.7■□□□□ 0.42
Vcam1P29533 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.7■□□□□ 0.42
Vcam1P29533 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vcam1P29533 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vcam1P29533 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms