Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.41■□□□□ 0.06
Nckap1P28660 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nckap1P28660 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.4■□□□□ 0.06
Nckap1P28660 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.4■□□□□ 0.06
Nckap1P28660 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nckap1P28660 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nckap1P28660 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.4■□□□□ 0.06
Nckap1P28660 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nckap1P28660 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nckap1P28660 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.4■□□□□ 0.06
Nckap1P28660 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.39■□□□□ 0.05
Nckap1P28660 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.39■□□□□ 0.05
Nckap1P28660 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nckap1P28660 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Nckap1P28660 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.39■□□□□ 0.05
Nckap1P28660 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.39■□□□□ 0.05
Nckap1P28660 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Nckap1P28660 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.39■□□□□ 0.05
Nckap1P28660 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nckap1P28660 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.39■□□□□ 0.05
Nckap1P28660 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nckap1P28660 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nckap1P28660 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nckap1P28660 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Nckap1P28660 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Nckap1P28660 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.38■□□□□ 0.05
Nckap1P28660 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.38■□□□□ 0.05
Nckap1P28660 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.38■□□□□ 0.05
Nckap1P28660 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Nckap1P28660 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.38■□□□□ 0.05
Nckap1P28660 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.38■□□□□ 0.05
Nckap1P28660 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Nckap1P28660 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nckap1P28660 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nckap1P28660 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Nckap1P28660 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Nckap1P28660 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.37■□□□□ 0.05
Nckap1P28660 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.37■□□□□ 0.05
Nckap1P28660 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Nckap1P28660 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nckap1P28660 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Nckap1P28660 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nckap1P28660 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms