Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Pde6aP27664 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pde6aP27664 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pde6aP27664 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pde6aP27664 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.93■□□□□ 0.46
Pde6aP27664 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.93■□□□□ 0.46
Pde6aP27664 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.93■□□□□ 0.46
Pde6aP27664 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pde6aP27664 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.92■□□□□ 0.46
Pde6aP27664 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Gm4899-201ENSMUST00000178708 719 ntBASIC17.92■□□□□ 0.46
Pde6aP27664 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.92■□□□□ 0.46
Pde6aP27664 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Asic1-205ENSMUST00000228185 1818 ntBASIC17.92■□□□□ 0.46
Pde6aP27664 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pde6aP27664 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pde6aP27664 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pde6aP27664 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.91■□□□□ 0.46
Pde6aP27664 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Pde6aP27664 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Pde6aP27664 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pde6aP27664 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.91■□□□□ 0.46
Pde6aP27664 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pde6aP27664 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.91■□□□□ 0.46
Pde6aP27664 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pde6aP27664 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pde6aP27664 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.91■□□□□ 0.46
Pde6aP27664 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pde6aP27664 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.9■□□□□ 0.46
Pde6aP27664 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pde6aP27664 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pde6aP27664 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.9■□□□□ 0.46
Pde6aP27664 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.9■□□□□ 0.46
Pde6aP27664 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.9■□□□□ 0.46
Pde6aP27664 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pde6aP27664 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pde6aP27664 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms