Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cbx3P23198 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Cbx3P23198 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Cbx3P23198 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cbx3P23198 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cbx3P23198 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.15□□□□□ -0.14
Cbx3P23198 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Cbx3P23198 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cbx3P23198 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.15□□□□□ -0.14
Cbx3P23198 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.15□□□□□ -0.14
Cbx3P23198 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.15□□□□□ -0.14
Cbx3P23198 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Gm18666-201ENSMUST00000190039 958 ntBASIC14.15□□□□□ -0.14
Cbx3P23198 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.15□□□□□ -0.14
Cbx3P23198 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.15□□□□□ -0.14
Cbx3P23198 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cbx3P23198 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.15□□□□□ -0.14
Cbx3P23198 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cbx3P23198 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cbx3P23198 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.15
Cbx3P23198 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cbx3P23198 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cbx3P23198 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.14□□□□□ -0.15
Cbx3P23198 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cbx3P23198 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cbx3P23198 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cbx3P23198 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cbx3P23198 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Cbx3P23198 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.14□□□□□ -0.15
Cbx3P23198 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.14□□□□□ -0.15
Cbx3P23198 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Cbx3P23198 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.14□□□□□ -0.15
Cbx3P23198 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cbx3P23198 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Cbx3P23198 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Cbx3P23198 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cbx3P23198 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cbx3P23198 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cbx3P23198 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cbx3P23198 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cbx3P23198 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cbx3P23198 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.13□□□□□ -0.15
Cbx3P23198 Gm11249-201ENSMUST00000117071 859 ntBASIC14.13□□□□□ -0.15
Cbx3P23198 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cbx3P23198 Gm12382-201ENSMUST00000122005 922 ntBASIC14.13□□□□□ -0.15
Cbx3P23198 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cbx3P23198 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cbx3P23198 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cbx3P23198 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cbx3P23198 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cbx3P23198 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cbx3P23198 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms