Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.86□□□□□ -0.03
BdnfP21237 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.86□□□□□ -0.03
BdnfP21237 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
BdnfP21237 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Mir7071-201ENSMUST00000184847 69 ntBASIC14.86□□□□□ -0.03
BdnfP21237 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
BdnfP21237 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BdnfP21237 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BdnfP21237 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.86□□□□□ -0.03
BdnfP21237 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BdnfP21237 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.85□□□□□ -0.03
BdnfP21237 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
BdnfP21237 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
BdnfP21237 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.85□□□□□ -0.03
BdnfP21237 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.85□□□□□ -0.03
BdnfP21237 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
BdnfP21237 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.85□□□□□ -0.03
BdnfP21237 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.85□□□□□ -0.03
BdnfP21237 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.85□□□□□ -0.03
BdnfP21237 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.85□□□□□ -0.03
BdnfP21237 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.85□□□□□ -0.03
BdnfP21237 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.85□□□□□ -0.03
BdnfP21237 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
BdnfP21237 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
BdnfP21237 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
BdnfP21237 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BdnfP21237 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.84□□□□□ -0.03
BdnfP21237 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BdnfP21237 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.84□□□□□ -0.03
BdnfP21237 Mir6404-201ENSMUST00000183699 94 ntBASIC14.84□□□□□ -0.03
BdnfP21237 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
BdnfP21237 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.84□□□□□ -0.03
BdnfP21237 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BdnfP21237 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BdnfP21237 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
BdnfP21237 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BdnfP21237 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BdnfP21237 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
BdnfP21237 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BdnfP21237 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
BdnfP21237 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Efs-202ENSMUST00000227037 2540 ntBASIC14.83□□□□□ -0.04
BdnfP21237 Gm11950-201ENSMUST00000121615 838 ntBASIC14.83□□□□□ -0.04
BdnfP21237 Gm23634-201ENSMUST00000175071 91 ntBASIC14.83□□□□□ -0.04
BdnfP21237 Gm17808-201ENSMUST00000200859 894 ntBASIC14.83□□□□□ -0.04
BdnfP21237 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.83□□□□□ -0.04
BdnfP21237 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BdnfP21237 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms