Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RaraP11416 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
RaraP11416 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RaraP11416 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RaraP11416 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.77■□□□□ 0.28
RaraP11416 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RaraP11416 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RaraP11416 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RaraP11416 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RaraP11416 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.77■□□□□ 0.28
RaraP11416 Gm13836-201ENSMUST00000121159 501 ntBASIC16.77■□□□□ 0.28
RaraP11416 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RaraP11416 Rprl3-201ENSMUST00000157400 290 ntBASIC16.77■□□□□ 0.28
RaraP11416 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RaraP11416 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RaraP11416 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.77■□□□□ 0.28
RaraP11416 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RaraP11416 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RaraP11416 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RaraP11416 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RaraP11416 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RaraP11416 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RaraP11416 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RaraP11416 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.76■□□□□ 0.27
RaraP11416 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.76■□□□□ 0.27
RaraP11416 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.76■□□□□ 0.27
RaraP11416 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RaraP11416 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RaraP11416 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RaraP11416 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RaraP11416 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.75■□□□□ 0.27
RaraP11416 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.75■□□□□ 0.27
RaraP11416 Gm9172-201ENSMUST00000212092 954 ntBASIC16.75■□□□□ 0.27
RaraP11416 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.75■□□□□ 0.27
RaraP11416 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RaraP11416 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.75■□□□□ 0.27
RaraP11416 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RaraP11416 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
RaraP11416 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RaraP11416 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RaraP11416 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.74■□□□□ 0.27
RaraP11416 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.74■□□□□ 0.27
RaraP11416 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.74■□□□□ 0.27
RaraP11416 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.74■□□□□ 0.27
RaraP11416 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.74■□□□□ 0.27
RaraP11416 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.74■□□□□ 0.27
RaraP11416 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RaraP11416 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RaraP11416 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RaraP11416 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RaraP11416 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RaraP11416 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RaraP11416 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RaraP11416 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms