Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
NefmP08553 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC22.89■■□□□ 1.25
NefmP08553 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NefmP08553 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
NefmP08553 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NefmP08553 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NefmP08553 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC22.88■■□□□ 1.25
NefmP08553 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC22.88■■□□□ 1.25
NefmP08553 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Gm30437-201ENSMUST00000206086 1201 ntBASIC22.88■■□□□ 1.25
NefmP08553 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.88■■□□□ 1.25
NefmP08553 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
NefmP08553 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NefmP08553 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC22.88■■□□□ 1.25
NefmP08553 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NefmP08553 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NefmP08553 Gm45133-201ENSMUST00000207548 2773 ntBASIC22.87■■□□□ 1.25
NefmP08553 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NefmP08553 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
NefmP08553 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NefmP08553 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NefmP08553 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NefmP08553 Gm6345-202ENSMUST00000180900 204 ntBASIC22.87■■□□□ 1.25
NefmP08553 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
NefmP08553 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.87■■□□□ 1.25
NefmP08553 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NefmP08553 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC22.87■■□□□ 1.25
NefmP08553 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NefmP08553 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NefmP08553 Efs-202ENSMUST00000227037 2540 ntBASIC22.86■■□□□ 1.25
NefmP08553 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Gm4609-201ENSMUST00000106443 1002 ntBASIC22.86■■□□□ 1.25
NefmP08553 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.86■■□□□ 1.25
NefmP08553 Gm5138-201ENSMUST00000113842 1002 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm15191-201ENSMUST00000117933 1000 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm12182-201ENSMUST00000118655 1008 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm13882-201ENSMUST00000120886 1002 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm10284-201ENSMUST00000145057 1005 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm10481-201ENSMUST00000179228 1002 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm2574-201ENSMUST00000181051 1002 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm3200-201ENSMUST00000181493 1002 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm8825-201ENSMUST00000182565 998 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm4518-201ENSMUST00000182638 718 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm8330-201ENSMUST00000182754 1008 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm4575-201ENSMUST00000182991 1002 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm8709-201ENSMUST00000183230 1012 ntBASIC22.86■■□□□ 1.25
NefmP08553 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC22.86■■□□□ 1.25
NefmP08553 Gm45328-201ENSMUST00000210942 917 ntBASIC22.86■■□□□ 1.25
NefmP08553 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
NefmP08553 Gm10293-201ENSMUST00000076317 1002 ntBASIC22.86■■□□□ 1.25
NefmP08553 Gm6316-201ENSMUST00000082064 1020 ntBASIC22.86■■□□□ 1.25
NefmP08553 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NefmP08553 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
NefmP08553 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC22.85■■□□□ 1.25
NefmP08553 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
NefmP08553 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC22.85■■□□□ 1.25
NefmP08553 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
NefmP08553 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC22.85■■□□□ 1.25
NefmP08553 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NefmP08553 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
NefmP08553 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NefmP08553 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NefmP08553 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
NefmP08553 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
NefmP08553 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NefmP08553 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms