Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ApoeP08226 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ApoeP08226 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
ApoeP08226 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Gm27011-201ENSMUST00000182352 972 ntBASIC14.67□□□□□ -0.06
ApoeP08226 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.67□□□□□ -0.06
ApoeP08226 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.67□□□□□ -0.06
ApoeP08226 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.67□□□□□ -0.06
ApoeP08226 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ApoeP08226 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ApoeP08226 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Efs-202ENSMUST00000227037 2540 ntBASIC14.66□□□□□ -0.06
ApoeP08226 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ApoeP08226 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ApoeP08226 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.66□□□□□ -0.06
ApoeP08226 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.66□□□□□ -0.06
ApoeP08226 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ApoeP08226 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ApoeP08226 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ApoeP08226 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ApoeP08226 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ApoeP08226 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ApoeP08226 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ApoeP08226 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ApoeP08226 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ApoeP08226 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ApoeP08226 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.65□□□□□ -0.06
ApoeP08226 Gm13436-201ENSMUST00000120418 567 ntBASIC14.65□□□□□ -0.06
ApoeP08226 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.65□□□□□ -0.06
ApoeP08226 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.65□□□□□ -0.06
ApoeP08226 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.65□□□□□ -0.06
ApoeP08226 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ApoeP08226 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ApoeP08226 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ApoeP08226 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ApoeP08226 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ApoeP08226 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ApoeP08226 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ApoeP08226 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ApoeP08226 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ApoeP08226 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
ApoeP08226 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms