Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm27437-201ENSMUST00000183429 107 ntBASIC14.28□□□□□ -0.12
Col4a2P08122 Gm29541-201ENSMUST00000191351 678 ntBASIC14.28□□□□□ -0.12
Col4a2P08122 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col4a2P08122 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.28□□□□□ -0.12
Col4a2P08122 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col4a2P08122 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a2P08122 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Col4a2P08122 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a2P08122 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a2P08122 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a2P08122 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.27□□□□□ -0.12
Col4a2P08122 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.27□□□□□ -0.12
Col4a2P08122 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a2P08122 Gm27618-201ENSMUST00000183671 60 ntBASIC14.27□□□□□ -0.12
Col4a2P08122 Gm5745-201ENSMUST00000183748 313 ntBASIC14.27□□□□□ -0.12
Col4a2P08122 Mir7684-201ENSMUST00000183858 60 ntBASIC14.27□□□□□ -0.12
Col4a2P08122 Gm5779-201ENSMUST00000218467 910 ntBASIC14.27□□□□□ -0.12
Col4a2P08122 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Col4a2P08122 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Col4a2P08122 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a2P08122 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a2P08122 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Col4a2P08122 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Col4a2P08122 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.27□□□□□ -0.13
Col4a2P08122 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.27□□□□□ -0.13
Col4a2P08122 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Col4a2P08122 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.27□□□□□ -0.13
Col4a2P08122 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a2P08122 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.26□□□□□ -0.13
Col4a2P08122 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a2P08122 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a2P08122 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a2P08122 App-207ENSMUST00000227737 2827 ntBASIC14.26□□□□□ -0.13
Col4a2P08122 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a2P08122 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a2P08122 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Col4a2P08122 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a2P08122 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a2P08122 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a2P08122 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Col4a2P08122 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.26□□□□□ -0.13
Col4a2P08122 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.26□□□□□ -0.13
Col4a2P08122 Gm18737-201ENSMUST00000173594 937 ntBASIC14.26□□□□□ -0.13
Col4a2P08122 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.26□□□□□ -0.13
Col4a2P08122 Gm27430-201ENSMUST00000184585 107 ntBASIC14.26□□□□□ -0.13
Col4a2P08122 Gm44333-201ENSMUST00000197168 107 ntBASIC14.26□□□□□ -0.13
Col4a2P08122 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a2P08122 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a2P08122 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.25□□□□□ -0.13
Col4a2P08122 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.25□□□□□ -0.13
Col4a2P08122 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.25□□□□□ -0.13
Col4a2P08122 Gm12151-201ENSMUST00000121374 290 ntBASIC14.25□□□□□ -0.13
Col4a2P08122 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.25□□□□□ -0.13
Col4a2P08122 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col4a2P08122 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Col4a2P08122 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col4a2P08122 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Col4a2P08122 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.25□□□□□ -0.13
Col4a2P08122 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a2P08122 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col4a2P08122 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col4a2P08122 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col4a2P08122 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a2P08122 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.24□□□□□ -0.13
Col4a2P08122 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.24□□□□□ -0.13
Col4a2P08122 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a2P08122 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col4a2P08122 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a2P08122 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a2P08122 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms