Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
P04224 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.62□□□□□ -0.23
P04224 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.62□□□□□ -0.23
P04224 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.62□□□□□ -0.23
P04224 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Gm13186-201ENSMUST00000118031 316 ntBASIC13.62□□□□□ -0.23
P04224 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.62□□□□□ -0.23
P04224 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.62□□□□□ -0.23
P04224 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.62□□□□□ -0.23
P04224 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
P04224 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
P04224 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P04224 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
P04224 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
P04224 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.61□□□□□ -0.23
P04224 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
P04224 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.61□□□□□ -0.23
P04224 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.61□□□□□ -0.23
P04224 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.61□□□□□ -0.23
P04224 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.61□□□□□ -0.23
P04224 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
P04224 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
P04224 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.61□□□□□ -0.23
P04224 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
P04224 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P04224 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.6□□□□□ -0.23
P04224 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
P04224 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
P04224 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.6□□□□□ -0.23
P04224 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.6□□□□□ -0.23
P04224 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.6□□□□□ -0.23
P04224 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.6□□□□□ -0.23
P04224 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.6□□□□□ -0.23
P04224 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
P04224 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.6□□□□□ -0.23
P04224 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P04224 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
P04224 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P04224 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms