Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
P04213 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Gm14859-201ENSMUST00000117752 357 ntBASIC14.87□□□□□ -0.03
P04213 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.87□□□□□ -0.03
P04213 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P04213 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.86□□□□□ -0.03
P04213 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
P04213 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
P04213 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
P04213 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
P04213 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.86□□□□□ -0.03
P04213 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Gm12497-201ENSMUST00000138778 237 ntBASIC14.86□□□□□ -0.03
P04213 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.86□□□□□ -0.03
P04213 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.86□□□□□ -0.03
P04213 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.86□□□□□ -0.03
P04213 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
P04213 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.86□□□□□ -0.03
P04213 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.86□□□□□ -0.03
P04213 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
P04213 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.86□□□□□ -0.03
P04213 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.86□□□□□ -0.03
P04213 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
P04213 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P04213 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
P04213 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
P04213 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
P04213 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
P04213 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.85□□□□□ -0.03
P04213 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
P04213 Gm17807-201ENSMUST00000186869 298 ntBASIC14.85□□□□□ -0.03
P04213 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.85□□□□□ -0.03
P04213 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
P04213 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
P04213 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
P04213 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P04213 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04213 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04213 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04213 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04213 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
P04213 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
P04213 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04213 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
P04213 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
P04213 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms