Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hoxa3P02831 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hoxa3P02831 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Gm27628-201ENSMUST00000184911 107 ntBASIC12.99□□□□□ -0.33
Hoxa3P02831 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hoxa3P02831 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.99□□□□□ -0.33
Hoxa3P02831 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Gm13036-201ENSMUST00000117799 748 ntBASIC12.98□□□□□ -0.33
Hoxa3P02831 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.98□□□□□ -0.33
Hoxa3P02831 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.98□□□□□ -0.33
Hoxa3P02831 Psmb5-202ENSMUST00000227257 622 ntBASIC12.98□□□□□ -0.33
Hoxa3P02831 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hoxa3P02831 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Hoxa3P02831 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Hoxa3P02831 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa3P02831 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa3P02831 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxa3P02831 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa3P02831 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa3P02831 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Gm11779-201ENSMUST00000118541 368 ntBASIC12.97□□□□□ -0.33
Hoxa3P02831 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.97□□□□□ -0.33
Hoxa3P02831 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.97□□□□□ -0.33
Hoxa3P02831 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.97□□□□□ -0.33
Hoxa3P02831 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa3P02831 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.97□□□□□ -0.33
Hoxa3P02831 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.97□□□□□ -0.33
Hoxa3P02831 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa3P02831 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hoxa3P02831 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hoxa3P02831 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms