Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
TcraP01849 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TcraP01849 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.59
TcraP01849 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.33□□□□□ -0.6
TcraP01849 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.33□□□□□ -0.6
TcraP01849 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.33□□□□□ -0.6
TcraP01849 Gm9731-201ENSMUST00000209480 747 ntBASIC11.33□□□□□ -0.6
TcraP01849 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TcraP01849 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.33□□□□□ -0.6
TcraP01849 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.33□□□□□ -0.6
TcraP01849 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.33□□□□□ -0.6
TcraP01849 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TcraP01849 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.33□□□□□ -0.6
TcraP01849 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
TcraP01849 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TcraP01849 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.32□□□□□ -0.6
TcraP01849 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.32□□□□□ -0.6
TcraP01849 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TcraP01849 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TcraP01849 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.32□□□□□ -0.6
TcraP01849 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.32□□□□□ -0.6
TcraP01849 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.32□□□□□ -0.6
TcraP01849 Timm23-208ENSMUST00000226683 750 ntBASIC11.32□□□□□ -0.6
TcraP01849 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TcraP01849 Gm10812-201ENSMUST00000099864 546 ntBASIC11.32□□□□□ -0.6
TcraP01849 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.32□□□□□ -0.6
TcraP01849 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TcraP01849 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TcraP01849 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TcraP01849 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TcraP01849 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TcraP01849 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
TcraP01849 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TcraP01849 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
TcraP01849 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TcraP01849 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
TcraP01849 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TcraP01849 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms