Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Abcd4O89016 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.03□□□□□ -0.16
Abcd4O89016 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abcd4O89016 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.03□□□□□ -0.16
Abcd4O89016 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Abcd4O89016 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Abcd4O89016 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd4O89016 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd4O89016 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd4O89016 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd4O89016 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd4O89016 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd4O89016 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd4O89016 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd4O89016 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Abcd4O89016 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.02□□□□□ -0.17
Abcd4O89016 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.02□□□□□ -0.17
Abcd4O89016 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.02□□□□□ -0.17
Abcd4O89016 Gm11780-201ENSMUST00000136880 516 ntBASIC14.02□□□□□ -0.17
Abcd4O89016 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.02□□□□□ -0.17
Abcd4O89016 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.02□□□□□ -0.17
Abcd4O89016 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Gm27525-201ENSMUST00000184465 107 ntBASIC14.02□□□□□ -0.17
Abcd4O89016 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.02□□□□□ -0.17
Abcd4O89016 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.02□□□□□ -0.17
Abcd4O89016 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.02□□□□□ -0.17
Abcd4O89016 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Abcd4O89016 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Abcd4O89016 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Abcd4O89016 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abcd4O89016 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Asic1-205ENSMUST00000228185 1818 ntBASIC14.01□□□□□ -0.17
Abcd4O89016 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.01□□□□□ -0.17
Abcd4O89016 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Abcd4O89016 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.01□□□□□ -0.17
Abcd4O89016 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Abcd4O89016 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Abcd4O89016 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.01□□□□□ -0.17
Abcd4O89016 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.01□□□□□ -0.17
Abcd4O89016 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Abcd4O89016 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.01□□□□□ -0.17
Abcd4O89016 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.01□□□□□ -0.17
Abcd4O89016 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.01□□□□□ -0.17
Abcd4O89016 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.01□□□□□ -0.17
Abcd4O89016 Gm15590-201ENSMUST00000078419 552 ntBASIC14.01□□□□□ -0.17
Abcd4O89016 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Abcd4O89016 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Abcd4O89016 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abcd4O89016 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.01□□□□□ -0.17
Abcd4O89016 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms