Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClppO88696 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ClppO88696 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ClppO88696 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Gm11780-201ENSMUST00000136880 516 ntBASIC15.11■□□□□ 0.01
ClppO88696 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ClppO88696 Gm8000-201ENSMUST00000188378 592 ntBASIC15.11■□□□□ 0.01
ClppO88696 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.11■□□□□ 0.01
ClppO88696 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Gm5867-201ENSMUST00000063197 592 ntBASIC15.11■□□□□ 0.01
ClppO88696 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ClppO88696 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ClppO88696 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ClppO88696 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ClppO88696 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ClppO88696 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.1■□□□□ 0.01
ClppO88696 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ClppO88696 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.1■□□□□ 0.01
ClppO88696 Gm6550-201ENSMUST00000187574 993 ntBASIC15.1■□□□□ 0.01
ClppO88696 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.1■□□□□ 0.01
ClppO88696 Psmb5-202ENSMUST00000227257 622 ntBASIC15.1■□□□□ 0.01
ClppO88696 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.1■□□□□ 0.01
ClppO88696 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.1■□□□□ 0.01
ClppO88696 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClppO88696 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.09■□□□□ 0.01
ClppO88696 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.09■□□□□ 0.01
ClppO88696 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.09■□□□□ 0.01
ClppO88696 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.09■□□□□ 0.01
ClppO88696 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ClppO88696 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.09■□□□□ 0.01
ClppO88696 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.09■□□□□ 0.01
ClppO88696 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.09■□□□□ 0.01
ClppO88696 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.09■□□□□ 0.01
ClppO88696 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.09■□□□□ 0.01
ClppO88696 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ClppO88696 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ClppO88696 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ClppO88696 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
ClppO88696 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms