Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.85■□□□□ 0.61
Cops6O88545 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cops6O88545 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Cops6O88545 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Cops6O88545 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.84■□□□□ 0.61
Cops6O88545 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.84■□□□□ 0.61
Cops6O88545 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Rprl2-201ENSMUST00000157150 290 ntBASIC18.84■□□□□ 0.61
Cops6O88545 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.84■□□□□ 0.61
Cops6O88545 Gm18889-201ENSMUST00000174284 929 ntBASIC18.84■□□□□ 0.61
Cops6O88545 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.84■□□□□ 0.61
Cops6O88545 Mir6990-201ENSMUST00000183724 91 ntBASIC18.84■□□□□ 0.61
Cops6O88545 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.84■□□□□ 0.61
Cops6O88545 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cops6O88545 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cops6O88545 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cops6O88545 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.84■□□□□ 0.61
Cops6O88545 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cops6O88545 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cops6O88545 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cops6O88545 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.83■□□□□ 0.61
Cops6O88545 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cops6O88545 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cops6O88545 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.83■□□□□ 0.61
Cops6O88545 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cops6O88545 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Cops6O88545 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cops6O88545 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.83■□□□□ 0.6
Cops6O88545 Gm13616-201ENSMUST00000120600 222 ntBASIC18.83■□□□□ 0.6
Cops6O88545 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cops6O88545 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.83■□□□□ 0.6
Cops6O88545 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cops6O88545 Mir6956-201ENSMUST00000183598 62 ntBASIC18.83■□□□□ 0.6
Cops6O88545 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cops6O88545 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.83■□□□□ 0.6
Cops6O88545 Gm43474-201ENSMUST00000196415 774 ntBASIC18.83■□□□□ 0.6
Cops6O88545 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.83■□□□□ 0.6
Cops6O88545 Gm44872-201ENSMUST00000207864 420 ntBASIC18.83■□□□□ 0.6
Cops6O88545 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.83■□□□□ 0.6
Cops6O88545 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cops6O88545 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cops6O88545 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cops6O88545 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cops6O88545 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.83■□□□□ 0.6
Cops6O88545 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cops6O88545 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cops6O88545 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cops6O88545 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cops6O88545 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Cops6O88545 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cops6O88545 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.83■□□□□ 0.6
Cops6O88545 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops6O88545 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops6O88545 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cops6O88545 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops6O88545 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.82■□□□□ 0.6
Cops6O88545 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.82■□□□□ 0.6
Cops6O88545 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.82■□□□□ 0.6
Cops6O88545 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cops6O88545 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops6O88545 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.82■□□□□ 0.6
Cops6O88545 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops6O88545 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Cops6O88545 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.82■□□□□ 0.6
Cops6O88545 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.82■□□□□ 0.6
Cops6O88545 Gm10154-201ENSMUST00000084445 354 ntBASIC18.82■□□□□ 0.6
Cops6O88545 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cops6O88545 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.82■□□□□ 0.6
Cops6O88545 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Cops6O88545 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cops6O88545 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops6O88545 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops6O88545 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Cops6O88545 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cops6O88545 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Cops6O88545 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.81■□□□□ 0.6
Cops6O88545 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cops6O88545 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.81■□□□□ 0.6
Cops6O88545 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.81■□□□□ 0.6
Cops6O88545 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms