Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Mir449b-201ENSMUST00000104833 80 ntBASIC14.68□□□□□ -0.06
Tgfbr3O88393 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.68□□□□□ -0.06
Tgfbr3O88393 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.68□□□□□ -0.06
Tgfbr3O88393 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Mir7023-201ENSMUST00000185093 64 ntBASIC14.68□□□□□ -0.06
Tgfbr3O88393 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.68□□□□□ -0.06
Tgfbr3O88393 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.68□□□□□ -0.06
Tgfbr3O88393 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.68□□□□□ -0.06
Tgfbr3O88393 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tgfbr3O88393 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Gm22175-201ENSMUST00000175007 78 ntBASIC14.67□□□□□ -0.06
Tgfbr3O88393 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.67□□□□□ -0.06
Tgfbr3O88393 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tgfbr3O88393 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.66□□□□□ -0.06
Tgfbr3O88393 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tgfbr3O88393 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.65□□□□□ -0.06
Tgfbr3O88393 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Gm18057-201ENSMUST00000208220 503 ntBASIC14.65□□□□□ -0.06
Tgfbr3O88393 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.65□□□□□ -0.06
Tgfbr3O88393 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.65□□□□□ -0.06
Tgfbr3O88393 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Tgfbr3O88393 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms