Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vti1bO88384 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.81□□□□□ -0.04
Vti1bO88384 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vti1bO88384 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vti1bO88384 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.8□□□□□ -0.04
Vti1bO88384 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Vti1bO88384 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.8□□□□□ -0.04
Vti1bO88384 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.8□□□□□ -0.04
Vti1bO88384 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Vti1bO88384 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vti1bO88384 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vti1bO88384 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vti1bO88384 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vti1bO88384 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.79□□□□□ -0.04
Vti1bO88384 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vti1bO88384 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Olfr129-201ENSMUST00000122318 993 ntBASIC14.79□□□□□ -0.04
Vti1bO88384 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.79□□□□□ -0.04
Vti1bO88384 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vti1bO88384 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
Vti1bO88384 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vti1bO88384 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.78□□□□□ -0.04
Vti1bO88384 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.78□□□□□ -0.04
Vti1bO88384 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vti1bO88384 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Gm14859-201ENSMUST00000117752 357 ntBASIC14.78□□□□□ -0.04
Vti1bO88384 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Vti1bO88384 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.78□□□□□ -0.04
Vti1bO88384 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vti1bO88384 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1bO88384 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.77□□□□□ -0.04
Vti1bO88384 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1bO88384 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1bO88384 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1bO88384 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1bO88384 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1bO88384 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vti1bO88384 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1bO88384 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1bO88384 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vti1bO88384 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.77□□□□□ -0.04
Vti1bO88384 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.77□□□□□ -0.05
Vti1bO88384 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Vti1bO88384 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms