Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slc4a4O88343 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc4a4O88343 Prob1-201ENSMUST00000097619 3021 ntBASIC18.25■□□□□ 0.51
Slc4a4O88343 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.25■□□□□ 0.51
Slc4a4O88343 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.25■□□□□ 0.51
Slc4a4O88343 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.25■□□□□ 0.51
Slc4a4O88343 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc4a4O88343 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slc4a4O88343 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Slc4a4O88343 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc4a4O88343 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Slc4a4O88343 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc4a4O88343 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Slc4a4O88343 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Slc4a4O88343 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.24■□□□□ 0.51
Slc4a4O88343 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Slc4a4O88343 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.24■□□□□ 0.51
Slc4a4O88343 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc4a4O88343 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Slc4a4O88343 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.23■□□□□ 0.51
Slc4a4O88343 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.23■□□□□ 0.51
Slc4a4O88343 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Slc4a4O88343 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.23■□□□□ 0.51
Slc4a4O88343 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Slc4a4O88343 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.23■□□□□ 0.51
Slc4a4O88343 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc4a4O88343 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Slc4a4O88343 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Gm14494-201ENSMUST00000118786 435 ntBASIC18.22■□□□□ 0.51
Slc4a4O88343 Gm11594-201ENSMUST00000122313 162 ntBASIC18.22■□□□□ 0.51
Slc4a4O88343 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc4a4O88343 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.22■□□□□ 0.51
Slc4a4O88343 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc4a4O88343 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.22■□□□□ 0.51
Slc4a4O88343 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a4O88343 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a4O88343 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Slc4a4O88343 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc4a4O88343 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.21■□□□□ 0.51
Slc4a4O88343 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.21■□□□□ 0.51
Slc4a4O88343 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms