Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.12■□□□□ 0.17
Ttc3O88196 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ttc3O88196 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ttc3O88196 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ttc3O88196 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.12■□□□□ 0.17
Ttc3O88196 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Ttc3O88196 Dancr-204ENSMUST00000132389 2347 ntBASIC16.12■□□□□ 0.17
Ttc3O88196 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.11■□□□□ 0.17
Ttc3O88196 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ttc3O88196 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Ttc3O88196 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ttc3O88196 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.11■□□□□ 0.17
Ttc3O88196 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ttc3O88196 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.11■□□□□ 0.17
Ttc3O88196 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ttc3O88196 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.11■□□□□ 0.17
Ttc3O88196 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.11■□□□□ 0.17
Ttc3O88196 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.11■□□□□ 0.17
Ttc3O88196 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ttc3O88196 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ttc3O88196 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ttc3O88196 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ttc3O88196 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.1■□□□□ 0.17
Ttc3O88196 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.1■□□□□ 0.17
Ttc3O88196 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.1■□□□□ 0.17
Ttc3O88196 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ttc3O88196 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.09■□□□□ 0.17
Ttc3O88196 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ttc3O88196 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.09■□□□□ 0.17
Ttc3O88196 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ttc3O88196 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ttc3O88196 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.09■□□□□ 0.17
Ttc3O88196 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.09■□□□□ 0.17
Ttc3O88196 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.09■□□□□ 0.17
Ttc3O88196 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.09■□□□□ 0.17
Ttc3O88196 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ttc3O88196 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ttc3O88196 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms