Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.89■□□□□ 0.77
Ubr1O70481 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.89■□□□□ 0.77
Ubr1O70481 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Gm13823-201ENSMUST00000119930 345 ntBASIC19.88■□□□□ 0.77
Ubr1O70481 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ubr1O70481 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ubr1O70481 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Ubr1O70481 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.88■□□□□ 0.77
Ubr1O70481 Gm27306-201ENSMUST00000183970 107 ntBASIC19.88■□□□□ 0.77
Ubr1O70481 Gm27430-201ENSMUST00000184585 107 ntBASIC19.88■□□□□ 0.77
Ubr1O70481 Gm17837-201ENSMUST00000186435 985 ntBASIC19.88■□□□□ 0.77
Ubr1O70481 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Gm44333-201ENSMUST00000197168 107 ntBASIC19.88■□□□□ 0.77
Ubr1O70481 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.88■□□□□ 0.77
Ubr1O70481 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubr1O70481 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr1O70481 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.87■□□□□ 0.77
Ubr1O70481 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ubr1O70481 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr1O70481 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr1O70481 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.87■□□□□ 0.77
Ubr1O70481 Gm5866-201ENSMUST00000177881 973 ntBASIC19.87■□□□□ 0.77
Ubr1O70481 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr1O70481 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr1O70481 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.87■□□□□ 0.77
Ubr1O70481 Celf4-206ENSMUST00000224553 1729 ntBASIC19.87■□□□□ 0.77
Ubr1O70481 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr1O70481 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ubr1O70481 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ubr1O70481 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr1O70481 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr1O70481 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.86■□□□□ 0.77
Ubr1O70481 Gm25144-201ENSMUST00000179561 110 ntBASIC19.86■□□□□ 0.77
Ubr1O70481 Gm25352-201ENSMUST00000179815 110 ntBASIC19.86■□□□□ 0.77
Ubr1O70481 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.86■□□□□ 0.77
Ubr1O70481 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.86■□□□□ 0.77
Ubr1O70481 Gm7775-201ENSMUST00000218871 853 ntBASIC19.86■□□□□ 0.77
Ubr1O70481 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr1O70481 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr1O70481 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr1O70481 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr1O70481 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr1O70481 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.86■□□□□ 0.77
Ubr1O70481 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ubr1O70481 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ubr1O70481 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Ubr1O70481 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.85■□□□□ 0.77
Ubr1O70481 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.85■□□□□ 0.77
Ubr1O70481 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ubr1O70481 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ubr1O70481 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ubr1O70481 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Ubr1O70481 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.85■□□□□ 0.77
Ubr1O70481 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.85■□□□□ 0.77
Ubr1O70481 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.85■□□□□ 0.77
Ubr1O70481 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ubr1O70481 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Gm13453-201ENSMUST00000118708 357 ntBASIC19.84■□□□□ 0.77
Ubr1O70481 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ubr1O70481 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ubr1O70481 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ubr1O70481 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ubr1O70481 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.83■□□□□ 0.77
Ubr1O70481 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ubr1O70481 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ubr1O70481 Gm27533-201ENSMUST00000183800 152 ntBASIC19.83■□□□□ 0.77
Ubr1O70481 Gm38225-201ENSMUST00000194001 393 ntBASIC19.83■□□□□ 0.77
Ubr1O70481 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Ubr1O70481 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.83■□□□□ 0.77
Ubr1O70481 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms