Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.06□□□□□ -0.16
Pdlim3O70209 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Pdlim3O70209 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim3O70209 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.05□□□□□ -0.16
Pdlim3O70209 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.05□□□□□ -0.16
Pdlim3O70209 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.05□□□□□ -0.16
Pdlim3O70209 Gm22697-201ENSMUST00000175194 63 ntBASIC14.05□□□□□ -0.16
Pdlim3O70209 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.05□□□□□ -0.16
Pdlim3O70209 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Pdlim3O70209 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Pdlim3O70209 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pdlim3O70209 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pdlim3O70209 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Pdlim3O70209 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim3O70209 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.05□□□□□ -0.16
Pdlim3O70209 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.05□□□□□ -0.16
Pdlim3O70209 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pdlim3O70209 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pdlim3O70209 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.04□□□□□ -0.16
Pdlim3O70209 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.04□□□□□ -0.16
Pdlim3O70209 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pdlim3O70209 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.04□□□□□ -0.16
Pdlim3O70209 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.04□□□□□ -0.16
Pdlim3O70209 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.04□□□□□ -0.16
Pdlim3O70209 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pdlim3O70209 Gm9987-201ENSMUST00000069768 567 ntBASIC14.04□□□□□ -0.16
Pdlim3O70209 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.04□□□□□ -0.16
Pdlim3O70209 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pdlim3O70209 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pdlim3O70209 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim3O70209 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.03□□□□□ -0.16
Pdlim3O70209 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.03□□□□□ -0.16
Pdlim3O70209 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pdlim3O70209 Gm43799-201ENSMUST00000201845 579 ntBASIC14.03□□□□□ -0.16
Pdlim3O70209 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.03□□□□□ -0.16
Pdlim3O70209 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pdlim3O70209 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pdlim3O70209 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pdlim3O70209 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.03□□□□□ -0.16
Pdlim3O70209 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.03□□□□□ -0.16
Pdlim3O70209 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.03□□□□□ -0.16
Pdlim3O70209 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Pdlim3O70209 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pdlim3O70209 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pdlim3O70209 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms