Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
Pja1O55176 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.36■□□□□ 0.21
Pja1O55176 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.36■□□□□ 0.21
Pja1O55176 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.36■□□□□ 0.21
Pja1O55176 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.36■□□□□ 0.21
Pja1O55176 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Pja1O55176 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pja1O55176 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.36■□□□□ 0.21
Pja1O55176 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pja1O55176 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Pja1O55176 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm14722-201ENSMUST00000118943 689 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.35■□□□□ 0.21
Pja1O55176 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pja1O55176 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm8825-201ENSMUST00000182565 998 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm4518-201ENSMUST00000182638 718 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.35■□□□□ 0.21
Pja1O55176 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.35■□□□□ 0.21
Pja1O55176 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.35■□□□□ 0.21
Pja1O55176 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pja1O55176 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pja1O55176 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Pja1O55176 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Pja1O55176 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pja1O55176 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pja1O55176 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pja1O55176 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pja1O55176 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.34■□□□□ 0.21
Pja1O55176 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pja1O55176 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pja1O55176 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pja1O55176 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.34■□□□□ 0.21
Pja1O55176 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Pja1O55176 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pja1O55176 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
Pja1O55176 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.34■□□□□ 0.21
Pja1O55176 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pja1O55176 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.34■□□□□ 0.21
Pja1O55176 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.33■□□□□ 0.21
Pja1O55176 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pja1O55176 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pja1O55176 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pja1O55176 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Pja1O55176 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.33■□□□□ 0.2
Pja1O55176 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.33■□□□□ 0.2
Pja1O55176 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pja1O55176 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms