Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm44771-201ENSMUST00000206975 626 ntBASIC11.55□□□□□ -0.56
Rpl35aO55142 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpl35aO55142 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rpl35aO55142 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpl35aO55142 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpl35aO55142 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpl35aO55142 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpl35aO55142 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpl35aO55142 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpl35aO55142 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rpl35aO55142 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rpl35aO55142 Grk6-207ENSMUST00000225925 2769 ntBASIC11.55□□□□□ -0.56
Rpl35aO55142 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rpl35aO55142 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.55□□□□□ -0.56
Rpl35aO55142 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.54□□□□□ -0.56
Rpl35aO55142 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.54□□□□□ -0.56
Rpl35aO55142 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Rpl35aO55142 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.54□□□□□ -0.56
Rpl35aO55142 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.54□□□□□ -0.56
Rpl35aO55142 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.54□□□□□ -0.56
Rpl35aO55142 Gm18733-201ENSMUST00000173950 856 ntBASIC11.54□□□□□ -0.56
Rpl35aO55142 Mir5131-201ENSMUST00000175426 93 ntBASIC11.54□□□□□ -0.56
Rpl35aO55142 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Rpl35aO55142 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.54□□□□□ -0.56
Rpl35aO55142 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rpl35aO55142 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Rpl35aO55142 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.53□□□□□ -0.56
Rpl35aO55142 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.53□□□□□ -0.56
Rpl35aO55142 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.53□□□□□ -0.56
Rpl35aO55142 Gm10060-201ENSMUST00000212002 111 ntBASIC11.53□□□□□ -0.56
Rpl35aO55142 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.53□□□□□ -0.56
Rpl35aO55142 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rpl35aO55142 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rpl35aO55142 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms