Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17■□□□□ 0.31
Trdmt1O55055 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trdmt1O55055 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17■□□□□ 0.31
Trdmt1O55055 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17■□□□□ 0.31
Trdmt1O55055 Gm24158-201ENSMUST00000175263 71 ntBASIC17■□□□□ 0.31
Trdmt1O55055 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Gm27430-201ENSMUST00000184585 107 ntBASIC17■□□□□ 0.31
Trdmt1O55055 Gm44333-201ENSMUST00000197168 107 ntBASIC17■□□□□ 0.31
Trdmt1O55055 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trdmt1O55055 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17■□□□□ 0.31
Trdmt1O55055 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trdmt1O55055 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Trdmt1O55055 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Trdmt1O55055 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.99■□□□□ 0.31
Trdmt1O55055 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trdmt1O55055 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trdmt1O55055 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdmt1O55055 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdmt1O55055 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.98■□□□□ 0.31
Trdmt1O55055 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdmt1O55055 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdmt1O55055 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trdmt1O55055 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Trdmt1O55055 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.98■□□□□ 0.31
Trdmt1O55055 Gm6973-201ENSMUST00000117080 721 ntBASIC16.98■□□□□ 0.31
Trdmt1O55055 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.98■□□□□ 0.31
Trdmt1O55055 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.98■□□□□ 0.31
Trdmt1O55055 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trdmt1O55055 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.98■□□□□ 0.31
Trdmt1O55055 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdmt1O55055 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdmt1O55055 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdmt1O55055 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdmt1O55055 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trdmt1O55055 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trdmt1O55055 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdmt1O55055 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdmt1O55055 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.97■□□□□ 0.31
Trdmt1O55055 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.97■□□□□ 0.31
Trdmt1O55055 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms