Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cxcl13O55038 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Gm44492-201ENSMUST00000197012 141 ntBASIC13.08□□□□□ -0.32
Cxcl13O55038 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.08□□□□□ -0.32
Cxcl13O55038 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.08□□□□□ -0.32
Cxcl13O55038 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Cxcl13O55038 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Cxcl13O55038 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cxcl13O55038 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cxcl13O55038 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cxcl13O55038 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.07□□□□□ -0.32
Cxcl13O55038 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.07□□□□□ -0.32
Cxcl13O55038 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Gm17968-201ENSMUST00000194902 784 ntBASIC13.07□□□□□ -0.32
Cxcl13O55038 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Cxcl13O55038 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cxcl13O55038 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.07□□□□□ -0.32
Cxcl13O55038 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.07□□□□□ -0.32
Cxcl13O55038 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Cxcl13O55038 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cxcl13O55038 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cxcl13O55038 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.07□□□□□ -0.32
Cxcl13O55038 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.06□□□□□ -0.32
Cxcl13O55038 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Cxcl13O55038 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.06□□□□□ -0.32
Cxcl13O55038 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cxcl13O55038 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cxcl13O55038 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.06□□□□□ -0.32
Cxcl13O55038 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cxcl13O55038 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cxcl13O55038 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cxcl13O55038 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl13O55038 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cxcl13O55038 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.05□□□□□ -0.32
Cxcl13O55038 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cxcl13O55038 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.05□□□□□ -0.32
Cxcl13O55038 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.05□□□□□ -0.32
Cxcl13O55038 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cxcl13O55038 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl13O55038 Gm10499-201ENSMUST00000174094 934 ntBASIC13.05□□□□□ -0.32
Cxcl13O55038 Gm5177-201ENSMUST00000183092 997 ntBASIC13.05□□□□□ -0.32
Cxcl13O55038 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.05□□□□□ -0.32
Cxcl13O55038 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.05□□□□□ -0.32
Cxcl13O55038 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms