Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
DffbO54788 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
DffbO54788 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DffbO54788 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DffbO54788 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.34□□□□□ -0.27
DffbO54788 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DffbO54788 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
DffbO54788 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DffbO54788 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
DffbO54788 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
DffbO54788 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
DffbO54788 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DffbO54788 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DffbO54788 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
DffbO54788 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
DffbO54788 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.33□□□□□ -0.28
DffbO54788 Mir6404-201ENSMUST00000183699 94 ntBASIC13.33□□□□□ -0.28
DffbO54788 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.33□□□□□ -0.28
DffbO54788 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
DffbO54788 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
DffbO54788 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DffbO54788 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
DffbO54788 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
DffbO54788 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.32□□□□□ -0.28
DffbO54788 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
DffbO54788 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
DffbO54788 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
DffbO54788 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
DffbO54788 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.32□□□□□ -0.28
DffbO54788 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.32□□□□□ -0.28
DffbO54788 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.32□□□□□ -0.28
DffbO54788 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
DffbO54788 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
DffbO54788 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.32□□□□□ -0.28
DffbO54788 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
DffbO54788 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.32□□□□□ -0.28
DffbO54788 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DffbO54788 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DffbO54788 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
DffbO54788 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
DffbO54788 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DffbO54788 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Gm13836-201ENSMUST00000121159 501 ntBASIC13.31□□□□□ -0.28
DffbO54788 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.31□□□□□ -0.28
DffbO54788 Gm6257-201ENSMUST00000163864 910 ntBASIC13.31□□□□□ -0.28
DffbO54788 Gm18032-201ENSMUST00000222541 538 ntBASIC13.31□□□□□ -0.28
DffbO54788 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
DffbO54788 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DffbO54788 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DffbO54788 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DffbO54788 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
DffbO54788 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DffbO54788 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DffbO54788 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms