Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gm43575-201ENSMUST00000196420 516 ntBASIC15.71■□□□□ 0.11
Limk2O54785 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.71■□□□□ 0.11
Limk2O54785 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.71■□□□□ 0.11
Limk2O54785 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.71■□□□□ 0.11
Limk2O54785 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Limk2O54785 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Limk2O54785 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Limk2O54785 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Limk2O54785 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Limk2O54785 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.7■□□□□ 0.1
Limk2O54785 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Limk2O54785 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.7■□□□□ 0.1
Limk2O54785 Gm14140-201ENSMUST00000119999 995 ntBASIC15.7■□□□□ 0.1
Limk2O54785 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Limk2O54785 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.7■□□□□ 0.1
Limk2O54785 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.7■□□□□ 0.1
Limk2O54785 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.7■□□□□ 0.1
Limk2O54785 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Limk2O54785 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Limk2O54785 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Limk2O54785 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Limk2O54785 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Limk2O54785 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.69■□□□□ 0.1
Limk2O54785 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.69■□□□□ 0.1
Limk2O54785 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.69■□□□□ 0.1
Limk2O54785 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Limk2O54785 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Limk2O54785 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.68■□□□□ 0.1
Limk2O54785 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Limk2O54785 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Limk2O54785 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Gm14494-201ENSMUST00000118786 435 ntBASIC15.68■□□□□ 0.1
Limk2O54785 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.68■□□□□ 0.1
Limk2O54785 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.68■□□□□ 0.1
Limk2O54785 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.68■□□□□ 0.1
Limk2O54785 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Limk2O54785 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Limk2O54785 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.68■□□□□ 0.1
Limk2O54785 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.68■□□□□ 0.1
Limk2O54785 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms