Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC16.94■□□□□ 0.3
Sptlc1O35704 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sptlc1O35704 Gm27301-201ENSMUST00000184012 127 ntBASIC16.94■□□□□ 0.3
Sptlc1O35704 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Gm45612-201ENSMUST00000211320 160 ntBASIC16.94■□□□□ 0.3
Sptlc1O35704 Gm45696-201ENSMUST00000212088 985 ntBASIC16.94■□□□□ 0.3
Sptlc1O35704 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.94■□□□□ 0.3
Sptlc1O35704 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sptlc1O35704 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sptlc1O35704 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sptlc1O35704 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.93■□□□□ 0.3
Sptlc1O35704 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sptlc1O35704 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sptlc1O35704 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.93■□□□□ 0.3
Sptlc1O35704 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sptlc1O35704 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.92■□□□□ 0.3
Sptlc1O35704 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.92■□□□□ 0.3
Sptlc1O35704 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Sptlc1O35704 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sptlc1O35704 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.92■□□□□ 0.3
Sptlc1O35704 Mir1895-201ENSMUST00000122615 79 ntBASIC16.92■□□□□ 0.3
Sptlc1O35704 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.92■□□□□ 0.3
Sptlc1O35704 Gm11025-201ENSMUST00000140773 466 ntBASIC16.92■□□□□ 0.3
Sptlc1O35704 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sptlc1O35704 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Gm8318-201ENSMUST00000182954 872 ntBASIC16.92■□□□□ 0.3
Sptlc1O35704 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.92■□□□□ 0.3
Sptlc1O35704 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.92■□□□□ 0.3
Sptlc1O35704 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sptlc1O35704 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sptlc1O35704 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.91■□□□□ 0.3
Sptlc1O35704 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Sptlc1O35704 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.91■□□□□ 0.3
Sptlc1O35704 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.91■□□□□ 0.3
Sptlc1O35704 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.91■□□□□ 0.3
Sptlc1O35704 Thap2-203ENSMUST00000218989 527 ntBASIC16.91■□□□□ 0.3
Sptlc1O35704 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Sptlc1O35704 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sptlc1O35704 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sptlc1O35704 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sptlc1O35704 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms