Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.82□□□□□ -0.2
Alx4O35137 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx4O35137 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Alx4O35137 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.82□□□□□ -0.2
Alx4O35137 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.82□□□□□ -0.2
Alx4O35137 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Alx4O35137 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx4O35137 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx4O35137 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx4O35137 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx4O35137 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Alx4O35137 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx4O35137 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Alx4O35137 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Alx4O35137 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.81□□□□□ -0.2
Alx4O35137 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.81□□□□□ -0.2
Alx4O35137 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Alx4O35137 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Alx4O35137 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Alx4O35137 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.8□□□□□ -0.2
Alx4O35137 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Alx4O35137 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.8□□□□□ -0.2
Alx4O35137 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.8□□□□□ -0.2
Alx4O35137 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Alx4O35137 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.8□□□□□ -0.2
Alx4O35137 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.8□□□□□ -0.2
Alx4O35137 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Alx4O35137 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Alx4O35137 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Alx4O35137 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.79□□□□□ -0.2
Alx4O35137 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.79□□□□□ -0.2
Alx4O35137 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Gm12134-201ENSMUST00000122109 520 ntBASIC13.79□□□□□ -0.2
Alx4O35137 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Gm9013-201ENSMUST00000132939 882 ntBASIC13.79□□□□□ -0.2
Alx4O35137 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.79□□□□□ -0.2
Alx4O35137 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.79□□□□□ -0.2
Alx4O35137 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.79□□□□□ -0.2
Alx4O35137 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Alx4O35137 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Alx4O35137 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms