Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ebf3O08791 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ebf3O08791 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ebf3O08791 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.08■□□□□ 0.16
Ebf3O08791 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Ebf3O08791 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.08■□□□□ 0.16
Ebf3O08791 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.08■□□□□ 0.16
Ebf3O08791 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.08■□□□□ 0.16
Ebf3O08791 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ebf3O08791 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Ebf3O08791 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ebf3O08791 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.08■□□□□ 0.16
Ebf3O08791 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Ebf3O08791 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Ebf3O08791 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Gm8344-201ENSMUST00000119813 856 ntBASIC16.07■□□□□ 0.16
Ebf3O08791 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.07■□□□□ 0.16
Ebf3O08791 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ebf3O08791 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ebf3O08791 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Ebf3O08791 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.06■□□□□ 0.16
Ebf3O08791 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.06■□□□□ 0.16
Ebf3O08791 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Ebf3O08791 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.06■□□□□ 0.16
Ebf3O08791 Gm4899-201ENSMUST00000178708 719 ntBASIC16.06■□□□□ 0.16
Ebf3O08791 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.06■□□□□ 0.16
Ebf3O08791 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.06■□□□□ 0.16
Ebf3O08791 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ebf3O08791 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
Ebf3O08791 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ebf3O08791 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf3O08791 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Ebf3O08791 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf3O08791 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ebf3O08791 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.05■□□□□ 0.16
Ebf3O08791 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Ebf3O08791 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf3O08791 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf3O08791 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ebf3O08791 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.05■□□□□ 0.16
Ebf3O08791 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.05■□□□□ 0.16
Ebf3O08791 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.05■□□□□ 0.16
Ebf3O08791 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.05■□□□□ 0.16
Ebf3O08791 Gm27300-201ENSMUST00000184085 97 ntBASIC16.05■□□□□ 0.16
Ebf3O08791 Gm27335-201ENSMUST00000184758 97 ntBASIC16.05■□□□□ 0.16
Ebf3O08791 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.05■□□□□ 0.16
Ebf3O08791 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.05■□□□□ 0.16
Ebf3O08791 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ebf3O08791 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf3O08791 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf3O08791 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms