Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.2□□□□□ -0.3
Gm3727J3QM54 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.2□□□□□ -0.3
Gm3727J3QM54 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3727J3QM54 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.19□□□□□ -0.3
Gm3727J3QM54 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm3727J3QM54 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.19□□□□□ -0.3
Gm3727J3QM54 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.19□□□□□ -0.3
Gm3727J3QM54 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3727J3QM54 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3727J3QM54 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.17□□□□□ -0.3
Gm3727J3QM54 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.17□□□□□ -0.3
Gm3727J3QM54 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3727J3QM54 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms