Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Gm8410-201ENSMUST00000117225 605 ntBASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Gm15163-201ENSMUST00000120749 1302 ntBASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp6G5E8P0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Gm15321-201ENSMUST00000121290 288 ntBASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Rassf8-202ENSMUST00000058538 1131 ntBASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp6G5E8P0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Gm22189-201ENSMUST00000103822 86 ntBASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp6G5E8P0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Gm12859-201ENSMUST00000117834 427 ntBASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Gm7286-201ENSMUST00000182691 1007 ntBASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC21.32■■□□□ 1
Tubgcp6G5E8P0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC21.31■■□□□ 1
Tubgcp6G5E8P0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Gm13517-201ENSMUST00000120782 1495 ntBASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Gm18737-201ENSMUST00000173594 937 ntBASIC21.3■■□□□ 1
Tubgcp6G5E8P0 AC154239.3-201ENSMUST00000226933 674 ntBASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tubgcp6G5E8P0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms