Protein–RNA interactions for Protein: G5E861

Sclt1, Sodium channel and clathrin linker 1, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sclt1G5E861 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sclt1G5E861 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sclt1G5E861 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sclt1G5E861 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sclt1G5E861 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.68■□□□□ 0.26
Sclt1G5E861 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.68■□□□□ 0.26
Sclt1G5E861 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sclt1G5E861 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.68■□□□□ 0.26
Sclt1G5E861 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.68■□□□□ 0.26
Sclt1G5E861 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sclt1G5E861 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sclt1G5E861 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Sclt1G5E861 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sclt1G5E861 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.67■□□□□ 0.26
Sclt1G5E861 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.67■□□□□ 0.26
Sclt1G5E861 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sclt1G5E861 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Gm9172-201ENSMUST00000212092 954 ntBASIC16.67■□□□□ 0.26
Sclt1G5E861 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.67■□□□□ 0.26
Sclt1G5E861 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.67■□□□□ 0.26
Sclt1G5E861 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.67■□□□□ 0.26
Sclt1G5E861 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sclt1G5E861 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sclt1G5E861 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Sclt1G5E861 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.66■□□□□ 0.26
Sclt1G5E861 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.66■□□□□ 0.26
Sclt1G5E861 Gm15165-201ENSMUST00000118140 502 ntBASIC16.66■□□□□ 0.26
Sclt1G5E861 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Sclt1G5E861 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Sclt1G5E861 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Sclt1G5E861 Gm27357-201ENSMUST00000183754 135 ntBASIC16.66■□□□□ 0.26
Sclt1G5E861 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sclt1G5E861 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.66■□□□□ 0.26
Sclt1G5E861 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Gm7367-201ENSMUST00000057611 492 ntBASIC16.66■□□□□ 0.26
Sclt1G5E861 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sclt1G5E861 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sclt1G5E861 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sclt1G5E861 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sclt1G5E861 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sclt1G5E861 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sclt1G5E861 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sclt1G5E861 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sclt1G5E861 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sclt1G5E861 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.65■□□□□ 0.26
Sclt1G5E861 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.65■□□□□ 0.26
Sclt1G5E861 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms