Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna9G3X8Z7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna9G3X8Z7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Gm12644-201ENSMUST00000119935 606 ntBASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna9G3X8Z7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Gm8318-201ENSMUST00000182954 872 ntBASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Gm27646-201ENSMUST00000183989 110 ntBASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna9G3X8Z7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Gm14859-201ENSMUST00000117752 357 ntBASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Gm11780-201ENSMUST00000136880 516 ntBASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna9G3X8Z7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna9G3X8Z7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms