Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Gm43125-201ENSMUST00000201724 730 ntBASIC18.54■□□□□ 0.56
Ube4aE9Q735 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ube4aE9Q735 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.53■□□□□ 0.56
Ube4aE9Q735 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.53■□□□□ 0.56
Ube4aE9Q735 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.53■□□□□ 0.56
Ube4aE9Q735 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube4aE9Q735 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube4aE9Q735 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.52■□□□□ 0.56
Ube4aE9Q735 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.52■□□□□ 0.56
Ube4aE9Q735 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.52■□□□□ 0.56
Ube4aE9Q735 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube4aE9Q735 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ube4aE9Q735 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.52■□□□□ 0.56
Ube4aE9Q735 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ube4aE9Q735 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ube4aE9Q735 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Ube4aE9Q735 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ube4aE9Q735 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ube4aE9Q735 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ube4aE9Q735 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ube4aE9Q735 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.51■□□□□ 0.55
Ube4aE9Q735 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ube4aE9Q735 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.5■□□□□ 0.55
Ube4aE9Q735 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.5■□□□□ 0.55
Ube4aE9Q735 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.5■□□□□ 0.55
Ube4aE9Q735 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.5■□□□□ 0.55
Ube4aE9Q735 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms