Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC8.56□□□□□ -1.04
Herc1E9PZP8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Herc1E9PZP8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm4909-201ENSMUST00000118749 794 ntBASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm11793-201ENSMUST00000120433 981 ntBASIC8.55□□□□□ -1.04
Herc1E9PZP8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm18307-201ENSMUST00000206864 949 ntBASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm24543-201ENSMUST00000103867 82 ntBASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm27920-201ENSMUST00000183953 96 ntBASIC8.55□□□□□ -1.04
Herc1E9PZP8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm42900-201ENSMUST00000197184 2167 ntBASIC8.55□□□□□ -1.04
Herc1E9PZP8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm14130-201ENSMUST00000118417 987 ntBASIC8.55□□□□□ -1.04
Herc1E9PZP8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm38341-201ENSMUST00000195357 515 ntBASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gm5051-201ENSMUST00000204085 485 ntBASIC8.55□□□□□ -1.04
Herc1E9PZP8 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 AC169036.1-201ENSMUST00000227994 296 ntBASIC8.55□□□□□ -1.04
Herc1E9PZP8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Herc1E9PZP8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Gm17376-201ENSMUST00000166016 84 ntBASIC8.54□□□□□ -1.04
Herc1E9PZP8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Gm5354-201ENSMUST00000182417 973 ntBASIC8.54□□□□□ -1.04
Herc1E9PZP8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC8.54□□□□□ -1.04
Herc1E9PZP8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC8.54□□□□□ -1.04
Herc1E9PZP8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC8.54□□□□□ -1.04
Herc1E9PZP8 AC102291.3-201ENSMUST00000226566 405 ntBASIC8.54□□□□□ -1.04
Herc1E9PZP8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Gm13233-201ENSMUST00000118760 1443 ntBASIC8.54□□□□□ -1.04
Herc1E9PZP8 Gm13244-201ENSMUST00000118855 1446 ntBASIC8.54□□□□□ -1.04
Herc1E9PZP8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Gm36967-201ENSMUST00000193814 266 ntBASIC8.54□□□□□ -1.04
Herc1E9PZP8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Gm9816-201ENSMUST00000122292 1414 ntBASIC8.54□□□□□ -1.04
Herc1E9PZP8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Gm44545-201ENSMUST00000208262 746 ntBASIC8.54□□□□□ -1.04
Herc1E9PZP8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Herc1E9PZP8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc1E9PZP8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc1E9PZP8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc1E9PZP8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Herc1E9PZP8 Gm3508-201ENSMUST00000186012 792 ntBASIC8.53□□□□□ -1.04
Herc1E9PZP8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms