Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Gm15358-201ENSMUST00000119249 520 ntBASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Gm25925-201ENSMUST00000158314 306 ntBASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Gm6257-201ENSMUST00000163864 910 ntBASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Gm37153-201ENSMUST00000193637 231 ntBASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Pcdh17E9PXF0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Gm6736-201ENSMUST00000166583 948 ntBASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Gm2756-201ENSMUST00000195851 400 ntBASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh17E9PXF0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Gm43575-201ENSMUST00000196420 516 ntBASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh17E9PXF0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms